RNA–Protein interactions for RNA: ENST00000461277.2

ZNF496-202, Transcript of zinc finger protein 496, humanhuman

TSL 1 (best)

Gene ZNF496, Length 3,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF496-202ENST00000461277 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
ZNF496-202ENST00000461277 DCAF8L2P0C7V8 631 aa15.4■□□□□ 0.06
ZNF496-202ENST00000461277 SHROOM4Q9ULL8 1493 aa14.77□□□□□ -0.05
ZNF496-202ENST00000461277 SUPT5HO00267 1087 aaKnown RBP14.43□□□□□ -0.1
ZNF496-202ENST00000461277 ABCC9O60706 1549 aa14.24□□□□□ -0.13
ZNF496-202ENST00000461277 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
ZNF496-202ENST00000461277 PABPN1Q86U42 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
ZNF496-202ENST00000461277 CCDC180Q9P1Z9 1646 aa13.84□□□□□ -0.19
ZNF496-202ENST00000461277 ZCCHC6Q5VYS8 1495 aaKnown RBP13.75□□□□□ -0.21
ZNF496-202ENST00000461277 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
ZNF496-202ENST00000461277 MYT1Q01538 1121 aa13.59□□□□□ -0.23
ZNF496-202ENST00000461277 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
ZNF496-202ENST00000461277 SCRIBQ14160 1630 aa13.55□□□□□ -0.24
ZNF496-202ENST00000461277 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
ZNF496-202ENST00000461277 HRCP23327 699 aa13.5□□□□□ -0.25
ZNF496-202ENST00000461277 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
ZNF496-202ENST00000461277 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
ZNF496-202ENST00000461277 RB1CC1Q8TDY2 1594 aa13.26□□□□□ -0.29
ZNF496-202ENST00000461277 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
ZNF496-202ENST00000461277 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
ZNF496-202ENST00000461277 NACADO15069 1562 aa13.24□□□□□ -0.29
ZNF496-202ENST00000461277 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
ZNF496-202ENST00000461277 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
ZNF496-202ENST00000461277 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
ZNF496-202ENST00000461277 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
ZNF496-202ENST00000461277 TTBK1Q5TCY1 1321 aaPredicted RBP13.08□□□□□ -0.32
ZNF496-202ENST00000461277 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
ZNF496-202ENST00000461277 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
ZNF496-202ENST00000461277 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
ZNF496-202ENST00000461277 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
ZNF496-202ENST00000461277 BCL11AQ9H165 835 aa12.93□□□□□ -0.34
ZNF496-202ENST00000461277 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
ZNF496-202ENST00000461277 GTF3C3Q9Y5Q9 886 aa12.82□□□□□ -0.36
ZNF496-202ENST00000461277 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
ZNF496-202ENST00000461277 BAZ1AQ9NRL2 1556 aaPredicted RBP12.78□□□□□ -0.36
ZNF496-202ENST00000461277 WIZO95785 1651 aa12.77□□□□□ -0.37
ZNF496-202ENST00000461277 BAZ1BQ9UIG0 1483 aaKnown RBP12.74□□□□□ -0.37
ZNF496-202ENST00000461277 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
ZNF496-202ENST00000461277 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
ZNF496-202ENST00000461277 CENPBP07199 599 aaPredicted RBP12.69□□□□□ -0.38
ZNF496-202ENST00000461277 APLP2Q06481 763 aa12.68□□□□□ -0.38
ZNF496-202ENST00000461277 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
ZNF496-202ENST00000461277 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
ZNF496-202ENST00000461277 BICRAQ9NZM4 1560 aa12.62□□□□□ -0.39
ZNF496-202ENST00000461277 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
ZNF496-202ENST00000461277 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
ZNF496-202ENST00000461277 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
ZNF496-202ENST00000461277 FBLN2P98095 1184 aa12.6□□□□□ -0.39
ZNF496-202ENST00000461277 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
ZNF496-202ENST00000461277 ABCC8Q09428 1581 aa12.53□□□□□ -0.4
ZNF496-202ENST00000461277 UNC13AQ9UPW8 1703 aa12.52□□□□□ -0.4
ZNF496-202ENST00000461277 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
ZNF496-202ENST00000461277 ERICH6Q7L0X2 663 aa12.51□□□□□ -0.41
ZNF496-202ENST00000461277 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
ZNF496-202ENST00000461277 WRNQ14191 1432 aaPredicted RBP eCLIP12.49□□□□□ -0.41
ZNF496-202ENST00000461277 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
ZNF496-202ENST00000461277 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
ZNF496-202ENST00000461277 ARID3CA6NKF2 412 aa12.47□□□□□ -0.41
ZNF496-202ENST00000461277 ITGAEP38570 1179 aa12.45□□□□□ -0.42
ZNF496-202ENST00000461277 SOGA1O94964 1423 aa12.45□□□□□ -0.42
ZNF496-202ENST00000461277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
ZNF496-202ENST00000461277 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
ZNF496-202ENST00000461277 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
ZNF496-202ENST00000461277 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
ZNF496-202ENST00000461277 ANP32EQ9BTT0 268 aa12.36□□□□□ -0.43
ZNF496-202ENST00000461277 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
ZNF496-202ENST00000461277 CC2D2AQ9P2K1 1620 aa12.36□□□□□ -0.43
ZNF496-202ENST00000461277 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
ZNF496-202ENST00000461277 NESP48681 1621 aa12.33□□□□□ -0.44
ZNF496-202ENST00000461277 RUSC2Q8N2Y8 1516 aa12.33□□□□□ -0.44
ZNF496-202ENST00000461277 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
ZNF496-202ENST00000461277 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
ZNF496-202ENST00000461277 CCER1Q8TC90 406 aaPredicted RBP12.29□□□□□ -0.44
ZNF496-202ENST00000461277 CHMP7Q8WUX9 453 aaPredicted RBP12.24□□□□□ -0.45
ZNF496-202ENST00000461277 CUX2O14529 1486 aa12.24□□□□□ -0.45
ZNF496-202ENST00000461277 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
ZNF496-202ENST00000461277 DIEXFQ68CQ4 756 aaKnown RBP12.21□□□□□ -0.45
ZNF496-202ENST00000461277 KIF27Q86VH2 1401 aa12.21□□□□□ -0.46
ZNF496-202ENST00000461277 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.46
ZNF496-202ENST00000461277 FAM50AQ14320 339 aaKnown RBP12.19□□□□□ -0.46
ZNF496-202ENST00000461277 ANO8Q9HCE9 1232 aaPredicted RBP12.18□□□□□ -0.46
ZNF496-202ENST00000461277 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
ZNF496-202ENST00000461277 RAD54L2Q9Y4B4 1467 aa12.16□□□□□ -0.46
ZNF496-202ENST00000461277 CLIP1P30622 1438 aa12.15□□□□□ -0.46
ZNF496-202ENST00000461277 CARMIL1Q5VZK9 1371 aa12.14□□□□□ -0.47
ZNF496-202ENST00000461277 CFTRP13569 1480 aa12.14□□□□□ -0.47
ZNF496-202ENST00000461277 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
ZNF496-202ENST00000461277 GOLGA3Q08378 1498 aa12.11□□□□□ -0.47
ZNF496-202ENST00000461277 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
ZNF496-202ENST00000461277 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
ZNF496-202ENST00000461277 EEA1Q15075 1411 aa12.09□□□□□ -0.47
ZNF496-202ENST00000461277 RAPGEF2Q9Y4G8 1499 aa12.09□□□□□ -0.47
ZNF496-202ENST00000461277 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
ZNF496-202ENST00000461277 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
ZNF496-202ENST00000461277 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
ZNF496-202ENST00000461277 TNIKQ9UKE5 1360 aa12.08□□□□□ -0.48
ZNF496-202ENST00000461277 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
ZNF496-202ENST00000461277 ZNF777Q9ULD5 760 aaPredicted RBP12.05□□□□□ -0.48
ZNF496-202ENST00000461277 AQRO60306 1485 aaKnown RBP eCLIP12.04□□□□□ -0.482e-7■■■■■ 29
ZNF496-202ENST00000461277 IGF1RP08069 1367 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms