Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 CAP2P1-201ENST00000557743 1390 ntBASIC11.91□□□□□ -0.5
EPHA1P21709 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC11.91□□□□□ -0.5
EPHA1P21709 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
EPHA1P21709 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
EPHA1P21709 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
EPHA1P21709 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
EPHA1P21709 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
EPHA1P21709 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.91□□□□□ -0.5
EPHA1P21709 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
EPHA1P21709 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 AP000356.3-201ENST00000382243 753 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 AC026320.2-201ENST00000434379 478 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 AC078991.1-201ENST00000437297 610 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC11.9□□□□□ -0.5
EPHA1P21709 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 PGAM1P5-201ENST00000548011 764 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 NPM1P43-201ENST00000558669 786 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 AL031713.1-201ENST00000564813 661 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
EPHA1P21709 LINC01783-202ENST00000614408 828 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 MIR6769A-201ENST00000617340 73 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 BX284668.2-205ENST00000619677 828 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 AC007718.1-201ENST00000621078 280 ntBASIC11.9□□□□□ -0.5
EPHA1P21709 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
EPHA1P21709 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
EPHA1P21709 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
EPHA1P21709 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
EPHA1P21709 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.9□□□□□ -0.51
EPHA1P21709 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
EPHA1P21709 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.9□□□□□ -0.51
EPHA1P21709 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
EPHA1P21709 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.9□□□□□ -0.51
EPHA1P21709 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
EPHA1P21709 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
EPHA1P21709 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
EPHA1P21709 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
EPHA1P21709 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
EPHA1P21709 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
EPHA1P21709 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.9□□□□□ -0.51
EPHA1P21709 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
EPHA1P21709 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
EPHA1P21709 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
EPHA1P21709 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
EPHA1P21709 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
EPHA1P21709 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms