Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.06□□□□□ -0.16
ERCC2P18074 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 Z69890.1-201ENST00000382990 339 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 ACTBP14-201ENST00000411655 1089 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 AC078991.1-201ENST00000437297 610 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 KRT18P62-201ENST00000446618 1287 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.06□□□□□ -0.16
ERCC2P18074 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.06□□□□□ -0.16
ERCC2P18074 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ERCC2P18074 VENTXP3-201ENST00000546480 773 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ERCC2P18074 AC079328.1-201ENST00000560358 952 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.06□□□□□ -0.16
ERCC2P18074 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.06□□□□□ -0.16
ERCC2P18074 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.06□□□□□ -0.16
ERCC2P18074 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.06□□□□□ -0.16
ERCC2P18074 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.06□□□□□ -0.16
ERCC2P18074 AC092171.5-201ENST00000608012 942 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 AC107464.3-201ENST00000609172 737 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.06□□□□□ -0.16
ERCC2P18074 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 BEND3P3-201ENST00000611030 2440 ntBASIC14.06□□□□□ -0.16
ERCC2P18074 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ERCC2P18074 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.06□□□□□ -0.16
ERCC2P18074 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
ERCC2P18074 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERCC2P18074 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ERCC2P18074 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 AL137784.3-201ENST00000623858 2288 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERCC2P18074 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 AC041040.1-201ENST00000425197 460 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.05□□□□□ -0.16
ERCC2P18074 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.05□□□□□ -0.16
ERCC2P18074 FTLP1-201ENST00000449155 526 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 PIGCP1-201ENST00000527583 895 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.05□□□□□ -0.16
ERCC2P18074 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.05□□□□□ -0.16
ERCC2P18074 NUDT4P2-201ENST00000578341 546 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 RN7SL470P-201ENST00000583069 259 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.05□□□□□ -0.16
ERCC2P18074 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.05□□□□□ -0.16
ERCC2P18074 AC016629.1-201ENST00000596579 586 ntBASIC14.05□□□□□ -0.16
ERCC2P18074 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.05□□□□□ -0.16
ERCC2P18074 HELLS-212ENST00000630929 400 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms