Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC1P02654 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC1P02654 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.21□□□□□ -0.45
APOC1P02654 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.21□□□□□ -0.45
APOC1P02654 AC079336.7-201ENST00000623428 1078 ntBASIC12.21□□□□□ -0.45
APOC1P02654 AL008638.5-201ENST00000623814 1298 ntBASIC12.21□□□□□ -0.45
APOC1P02654 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 AL022323.5-201ENST00000624101 2059 ntBASIC12.21□□□□□ -0.45
APOC1P02654 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
APOC1P02654 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
APOC1P02654 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.21□□□□□ -0.46
APOC1P02654 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.21□□□□□ -0.46
APOC1P02654 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.21□□□□□ -0.46
APOC1P02654 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.21□□□□□ -0.46
APOC1P02654 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
APOC1P02654 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
APOC1P02654 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
APOC1P02654 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 AGAP12P-201ENST00000585227 2359 ntBASIC12.2□□□□□ -0.46
APOC1P02654 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 FRMPD2B-201ENST00000431305 1347 ntBASIC12.2□□□□□ -0.46
APOC1P02654 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.2□□□□□ -0.46
APOC1P02654 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.2□□□□□ -0.46
APOC1P02654 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 AC239868.1-201ENST00000369385 493 ntBASIC12.2□□□□□ -0.46
APOC1P02654 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.2□□□□□ -0.46
APOC1P02654 AC104306.2-201ENST00000451877 341 ntBASIC12.2□□□□□ -0.46
APOC1P02654 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 AC116345.2-201ENST00000512837 523 ntBASIC12.2□□□□□ -0.46
APOC1P02654 COQ10BP2-201ENST00000513804 724 ntBASIC12.2□□□□□ -0.46
APOC1P02654 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.2□□□□□ -0.46
APOC1P02654 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 AC138649.2-201ENST00000615886 705 ntBASIC12.2□□□□□ -0.46
APOC1P02654 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
APOC1P02654 AL805961.1-203ENST00000641078 1258 ntBASIC12.2□□□□□ -0.46
APOC1P02654 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
APOC1P02654 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
APOC1P02654 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.2□□□□□ -0.46
APOC1P02654 Z98885.3-201ENST00000624882 1757 ntBASIC12.2□□□□□ -0.46
APOC1P02654 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms