Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 HNRNPLP1-201ENST00000421896 1501 ntBASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 AC018735.1-201ENST00000437208 1502 ntBASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF6Q9Y4K3 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC104590.1-202ENST00000558368 1921 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 RBM22P2-201ENST00000393978 1814 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 BX324167.2-201ENST00000623717 3316 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 PES1P2-201ENST00000449745 1735 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC132825.4-202ENST00000578792 434 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 MIR4259-201ENST00000584466 101 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AL359881.2-201ENST00000602973 570 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC005695.3-201ENST00000614522 232 ntBASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAF6Q9Y4K3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 RN7SKP214-201ENST00000364208 315 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AC106827.1-201ENST00000366454 431 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AC125604.1-201ENST00000496255 707 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AC126915.1-201ENST00000522847 1038 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 MIR4326-201ENST00000582203 59 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 AL133467.4-201ENST00000602953 725 ntBASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAF6Q9Y4K3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms