Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC102953.2-201ENST00000609755 3026 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 KRT8P43-201ENST00000406052 1458 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AL118506.1-201ENST00000601296 3082 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 PYY2-201ENST00000315776 282 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 GUSBP10-201ENST00000417412 665 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC098935.1-201ENST00000446057 611 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 RPL7P35-201ENST00000446943 740 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 RN7SL788P-201ENST00000460504 316 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 KLF17P1-201ENST00000547105 1126 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 HERC2P11-201ENST00000562845 725 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC100756.2-201ENST00000569537 736 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 AP000322.3-201ENST00000608665 388 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC242376.2-201ENST00000619355 883 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC009145.4-201ENST00000625119 1294 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 FMO6P-201ENST00000236166 1620 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 KRT8P18-201ENST00000413425 1445 ntBASIC12.87□□□□□ -0.35
CNIH4Q9P003 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CNIH4Q9P003 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CNIH4Q9P003 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 MSNP1-201ENST00000511640 1732 ntBASIC12.86□□□□□ -0.35
CNIH4Q9P003 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 AP000437.1-201ENST00000624057 2085 ntBASIC12.86□□□□□ -0.35
CNIH4Q9P003 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 MIR33B-201ENST00000385104 96 ntBASIC12.86□□□□□ -0.35
CNIH4Q9P003 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.86□□□□□ -0.35
CNIH4Q9P003 AC078991.1-201ENST00000437297 610 ntBASIC12.86□□□□□ -0.35
CNIH4Q9P003 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CNIH4Q9P003 GRPEL2P1-201ENST00000453145 339 ntBASIC12.86□□□□□ -0.35
CNIH4Q9P003 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms