Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 AC104306.2-201ENST00000451877 341 ntBASIC13.01□□□□□ -0.33
CLK1P49759 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 KRT18P15-201ENST00000458108 1291 ntBASIC13.01□□□□□ -0.33
CLK1P49759 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.01□□□□□ -0.33
CLK1P49759 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.01□□□□□ -0.33
CLK1P49759 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.01□□□□□ -0.33
CLK1P49759 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CLK1P49759 BAP1-211ENST00000615113 489 ntBASIC13.01□□□□□ -0.33
CLK1P49759 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.01□□□□□ -0.33
CLK1P49759 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.01□□□□□ -0.33
CLK1P49759 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.01□□□□□ -0.33
CLK1P49759 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.01□□□□□ -0.33
CLK1P49759 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC13.01□□□□□ -0.33
CLK1P49759 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CLK1P49759 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
CLK1P49759 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLK1P49759 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLK1P49759 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13□□□□□ -0.33
CLK1P49759 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLK1P49759 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13□□□□□ -0.33
CLK1P49759 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 MARK2P5-201ENST00000507649 634 ntBASIC13□□□□□ -0.33
CLK1P49759 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13□□□□□ -0.33
CLK1P49759 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13□□□□□ -0.33
CLK1P49759 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13□□□□□ -0.33
CLK1P49759 AC013355.1-201ENST00000562625 723 ntBASIC13□□□□□ -0.33
CLK1P49759 RN7SL219P-201ENST00000582872 296 ntBASIC13□□□□□ -0.33
CLK1P49759 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13□□□□□ -0.33
CLK1P49759 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13□□□□□ -0.33
CLK1P49759 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13□□□□□ -0.33
CLK1P49759 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13□□□□□ -0.33
CLK1P49759 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13□□□□□ -0.33
CLK1P49759 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13□□□□□ -0.33
CLK1P49759 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLK1P49759 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLK1P49759 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLK1P49759 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLK1P49759 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 ABCD1P2-201ENST00000429313 1601 ntBASIC12.99□□□□□ -0.33
CLK1P49759 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.99□□□□□ -0.33
CLK1P49759 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.99□□□□□ -0.33
CLK1P49759 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLK1P49759 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms