Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.65■□□□□ 0.1
CLCN1P35523 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 AL355994.2-201ENST00000447882 704 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 HIST2H2BB-201ENST00000449108 381 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 KLF2P4-201ENST00000451959 1225 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.65■□□□□ 0.1
CLCN1P35523 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.65■□□□□ 0.1
CLCN1P35523 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.65■□□□□ 0.1
CLCN1P35523 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLCN1P35523 AC027237.1-201ENST00000560942 655 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 AP006547.1-201ENST00000563435 692 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.65■□□□□ 0.1
CLCN1P35523 AL136301.1-201ENST00000615830 422 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 AC009093.10-201ENST00000641956 1442 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 KIF28P-202ENST00000504864 3064 ntBASIC15.65■□□□□ 0.1
CLCN1P35523 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.65■□□□□ 0.1
CLCN1P35523 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLCN1P35523 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLCN1P35523 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CLCN1P35523 BOLA2P3-201ENST00000404566 256 ntBASIC15.64■□□□□ 0.09
CLCN1P35523 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.64■□□□□ 0.09
CLCN1P35523 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.64■□□□□ 0.09
CLCN1P35523 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.64■□□□□ 0.09
CLCN1P35523 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CLCN1P35523 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 AL035414.1-201ENST00000451327 857 ntBASIC15.64■□□□□ 0.09
CLCN1P35523 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.64■□□□□ 0.09
CLCN1P35523 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLCN1P35523 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.64■□□□□ 0.09
CLCN1P35523 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.64■□□□□ 0.09
CLCN1P35523 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCN1P35523 AC008687.7-202ENST00000637404 953 ntBASIC15.64■□□□□ 0.09
CLCN1P35523 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.64■□□□□ 0.09
CLCN1P35523 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCN1P35523 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLCN1P35523 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLCN1P35523 AC007614.4-201ENST00000564048 1827 ntBASIC15.64■□□□□ 0.09
CLCN1P35523 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLCN1P35523 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 E2F3P2-201ENST00000447755 1422 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 DGKZP1-201ENST00000378718 2776 ntBASIC15.63■□□□□ 0.09
CLCN1P35523 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCN1P35523 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCN1P35523 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.63■□□□□ 0.09
CLCN1P35523 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms