Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 OR8T1P-201ENST00000421347 918 ntBASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 AC125604.1-201ENST00000496255 707 ntBASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 NDUFB10P1-201ENST00000567319 521 ntBASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 AC073957.3-201ENST00000609998 6758 ntBASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 AC020763.3-201ENST00000625095 2904 ntBASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
POLR2J2Q9GZM3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TUBB1P2-201ENST00000422712 1306 ntBASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TUBB1P1-201ENST00000503144 1300 ntBASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 RN7SKP214-201ENST00000364208 315 ntBASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 PPP1R2P4-201ENST00000424051 595 ntBASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.73□□□□□ -0.37
POLR2J2Q9GZM3 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.72□□□□□ -0.37
POLR2J2Q9GZM3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms