Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CACNA1BQ00975 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CACNA1BQ00975 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CACNA1BQ00975 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.5□□□□□ -0.41
CACNA1BQ00975 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 SORD2P-201ENST00000558556 1069 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 AC116553.1-201ENST00000561752 397 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 AQP7P1-201ENST00000412626 1045 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 LSP1P3-201ENST00000449530 208 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 MTND6P9-201ENST00000458075 519 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 RN7SL521P-201ENST00000488398 297 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 AL606834.1-201ENST00000553836 1169 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 AC083841.4-201ENST00000637396 352 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 AC007326.2-201ENST00000624224 7579 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CACNA1BQ00975 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.49□□□□□ -0.41
CACNA1BQ00975 PTENP1-202ENST00000532280 3996 ntBASIC12.49□□□□□ -0.41
CACNA1BQ00975 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 QRFPR-201ENST00000334383 1215 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 GAMTP2-201ENST00000430917 463 ntBASIC12.48□□□□□ -0.41
CACNA1BQ00975 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 EHF-209ENST00000531728 485 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 RPL12-205ENST00000536368 499 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 AL031430.1-201ENST00000642067 1039 ntBASIC12.48□□□□□ -0.41
CACNA1BQ00975 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CACNA1BQ00975 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.48□□□□□ -0.41
CACNA1BQ00975 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms