Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC018638.5-201ENST00000450885 754 ntBASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC010234.1-201ENST00000494599 870 ntBASIC14.01□□□□□ -0.17
CAPN8A6NHC0 MRPL22P1-201ENST00000505398 616 ntBASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AP002803.1-201ENST00000528836 498 ntBASIC14.01□□□□□ -0.17
CAPN8A6NHC0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC138894.2-201ENST00000602838 371 ntBASIC14.01□□□□□ -0.17
CAPN8A6NHC0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAPN8A6NHC0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 VENTXP1-201ENST00000569334 2716 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 NCLP1-201ENST00000445357 1963 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 AL512430.1-201ENST00000392575 860 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14□□□□□ -0.17
CAPN8A6NHC0 FAU-202ENST00000434372 533 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14□□□□□ -0.17
CAPN8A6NHC0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14□□□□□ -0.17
CAPN8A6NHC0 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14□□□□□ -0.17
CAPN8A6NHC0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 MIR2392-201ENST00000584881 84 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14□□□□□ -0.17
CAPN8A6NHC0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14□□□□□ -0.17
CAPN8A6NHC0 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 AL031673.1-201ENST00000611460 466 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 AC138466.4-201ENST00000623965 852 ntBASIC14□□□□□ -0.17
CAPN8A6NHC0 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14□□□□□ -0.17
CAPN8A6NHC0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CAPN8A6NHC0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14□□□□□ -0.17
CAPN8A6NHC0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14□□□□□ -0.17
CAPN8A6NHC0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms