Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PHACTR1Q9C0D0 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PHACTR1Q9C0D0 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PHACTR1Q9C0D0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PHACTR1Q9C0D0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PHACTR1Q9C0D0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PHACTR1Q9C0D0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 MICA-210ENST00000616296 2260 ntTSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 FAM21FP-201ENST00000426241 1131 ntBASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 DUX4L50-201ENST00000455245 715 ntBASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 ACTG1P22-201ENST00000603793 1099 ntBASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 AL021707.6-201ENST00000609212 491 ntBASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 PAX6-247ENST00000638965 979 ntTSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 AC006144.1-201ENST00000424220 1600 ntBASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PHACTR1Q9C0D0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AL021155.1-201ENST00000438808 2637 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 MAX-212ENST00000555932 1673 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 KRT8P21-201ENST00000430398 1491 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 GGTLC4P-201ENST00000402176 664 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AC013355.1-201ENST00000562625 723 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AC007663.3-201ENST00000609632 465 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AL591926.3-201ENST00000611630 238 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 AL033527.4-201ENST00000641026 673 ntBASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.96□□□□□ -0.17
PHACTR1Q9C0D0 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms