Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 TUBB8P8-201ENST00000458717 1058 ntBASIC11.83□□□□□ -0.52
NICN1Q9BSH3 AC021723.1-201ENST00000486306 515 ntBASIC11.83□□□□□ -0.52
NICN1Q9BSH3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 AC005324.6-201ENST00000587972 613 ntBASIC11.83□□□□□ -0.52
NICN1Q9BSH3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 AP000346.4-201ENST00000614827 381 ntBASIC11.83□□□□□ -0.52
NICN1Q9BSH3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 AL031432.4-201ENST00000641729 2190 ntBASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NICN1Q9BSH3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AC245140.2-201ENST00000624054 1939 ntBASIC11.82□□□□□ -0.52
NICN1Q9BSH3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 TUBB2BP1-201ENST00000404155 871 ntBASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 MIR3615-201ENST00000581999 87 ntBASIC11.82□□□□□ -0.52
NICN1Q9BSH3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 AL358472.5-202ENST00000641448 1267 ntBASIC11.82□□□□□ -0.52
NICN1Q9BSH3 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 GDA-203ENST00000376986 1771 ntTSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NICN1Q9BSH3 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms