Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 BTNL10-201ENST00000595971 695 ntBASIC11.19□□□□□ -0.62
RAB40CQ96S21 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AP002353.1-201ENST00000528257 1599 ntBASIC11.19□□□□□ -0.62
RAB40CQ96S21 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 JDP2-203ENST00000435893 5401 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AC245140.2-201ENST00000624054 1939 ntBASIC11.19□□□□□ -0.62
RAB40CQ96S21 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 AC008132.1-202ENST00000342005 1389 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 COX5BP8-201ENST00000416911 349 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 OR2R1P-201ENST00000441404 914 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 BCRP2-202ENST00000447763 634 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 AC006122.1-201ENST00000493323 440 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 BCRP6-201ENST00000510112 632 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 BCRP7-201ENST00000511549 544 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 NCK2-206ENST00000522586 490 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 AL022328.1-201ENST00000610050 478 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 Z98259.2-201ENST00000641583 609 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
RAB40CQ96S21 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 AC138028.6-201ENST00000616106 1482 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.18□□□□□ -0.62
RAB40CQ96S21 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
RAB40CQ96S21 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms