Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC099521.3-201ENST00000624251 2938 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 RNVU1-8-201ENST00000364272 125 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 USP17L6P-201ENST00000382470 1197 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 LINC00634-202ENST00000505157 222 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 SNORD3B-1-201ENST00000577988 758 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 AC127024.7-201ENST00000625101 200 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 AC072061.1-201ENST00000569710 2234 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 AL805961.2-201ENST00000642139 4817 ntBASIC14.55□□□□□ -0.08
ATP2A3Q93084 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ATP2A3Q93084 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ATP2A3Q93084 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 TP73-203ENST00000357733 4899 ntTSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 ACTG1P19-201ENST00000418987 1116 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 GOLGA2P8-201ENST00000505201 779 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 KRT18P8-201ENST00000581937 1246 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 LINC00431-202ENST00000636375 159 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 SHMT1P1-201ENST00000419974 1312 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 KRT8P18-201ENST00000413425 1445 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 AL356585.2-201ENST00000625078 2396 ntBASIC14.54□□□□□ -0.08
ATP2A3Q93084 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.54□□□□□ -0.08
ATP2A3Q93084 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ATP2A3Q93084 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 AC005014.1-201ENST00000432006 2976 ntBASIC14.53□□□□□ -0.08
ATP2A3Q93084 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.53□□□□□ -0.08
ATP2A3Q93084 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ATP2A3Q93084 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms