Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTC1Q2NKJ3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 MYO15B-237ENST00000642007 4893 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 AC098657.1-201ENST00000416270 1135 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 FAM197Y6-201ENST00000420524 766 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 PEBP1P3-201ENST00000455475 548 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 AL031673.1-201ENST00000611460 466 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 AC048382.6-201ENST00000621980 1223 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 SALL4P6-201ENST00000429385 1691 ntBASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CTC1Q2NKJ3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AL773545.2-201ENST00000442149 472 ntBASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 TBC1D3P6-201ENST00000505954 962 ntBASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AC011431.1-201ENST00000512971 230 ntBASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 COQ10BP2-201ENST00000513804 724 ntBASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 KRT8P34-201ENST00000577607 1044 ntBASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 AC004466.2-201ENST00000614749 516 ntBASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CTC1Q2NKJ3 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms