Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 TUBB2BP1-201ENST00000404155 871 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 SNORD23-201ENST00000408876 110 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.29□□□□□ -0.44
ZIC3O60481 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.29□□□□□ -0.44
ZIC3O60481 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZIC3O60481 RN7SL351P-201ENST00000469306 248 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.29□□□□□ -0.44
ZIC3O60481 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.29□□□□□ -0.44
ZIC3O60481 AC090136.2-201ENST00000517809 420 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
ZIC3O60481 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.29□□□□□ -0.44
ZIC3O60481 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.29□□□□□ -0.44
ZIC3O60481 MIR4472-1-201ENST00000584349 80 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.29□□□□□ -0.44
ZIC3O60481 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 AC009084.3-201ENST00000623356 437 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 AC137723.2-201ENST00000623540 398 ntBASIC12.29□□□□□ -0.44
ZIC3O60481 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZIC3O60481 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.29□□□□□ -0.44
ZIC3O60481 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZIC3O60481 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.29□□□□□ -0.44
ZIC3O60481 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZIC3O60481 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZIC3O60481 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.29□□□□□ -0.44
ZIC3O60481 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.28□□□□□ -0.44
ZIC3O60481 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 AP000244.1-201ENST00000424582 201 ntBASIC12.28□□□□□ -0.44
ZIC3O60481 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.28□□□□□ -0.44
ZIC3O60481 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.28□□□□□ -0.44
ZIC3O60481 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.28□□□□□ -0.44
ZIC3O60481 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.28□□□□□ -0.44
ZIC3O60481 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.28□□□□□ -0.44
ZIC3O60481 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.28□□□□□ -0.44
ZIC3O60481 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.28□□□□□ -0.44
ZIC3O60481 AC073869.4-201ENST00000620841 800 ntBASIC12.28□□□□□ -0.44
ZIC3O60481 Z82244.1-201ENST00000631502 840 ntBASIC12.28□□□□□ -0.44
ZIC3O60481 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.28□□□□□ -0.44
ZIC3O60481 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ZIC3O60481 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZIC3O60481 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms