Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LOC285556D6RIA3 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 MIR181D-201ENST00000384853 137 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 PPP1R2P10-201ENST00000393023 595 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 AC007312.1-201ENST00000427493 258 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 PLAC9P1-203ENST00000440031 223 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 AL137077.1-201ENST00000442115 528 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 ST3GAL1P1-201ENST00000513810 1014 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 AC091736.1-201ENST00000609370 305 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC15.08■□□□□ 0.01
LOC285556D6RIA3 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
LOC285556D6RIA3 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LOC285556D6RIA3 AC004623.1-201ENST00000624592 2127 ntBASIC15.08■□□□□ 0
LOC285556D6RIA3 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC15.08■□□□□ 0
LOC285556D6RIA3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 OR7E122P-201ENST00000383606 1017 ntBASIC15.08■□□□□ 0
LOC285556D6RIA3 CD33-202ENST00000391796 1089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC15.08■□□□□ 0
LOC285556D6RIA3 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC15.08■□□□□ 0
LOC285556D6RIA3 RN7SL477P-201ENST00000488440 286 ntBASIC15.08■□□□□ 0
LOC285556D6RIA3 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC15.08■□□□□ 0
LOC285556D6RIA3 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC15.08■□□□□ 0
LOC285556D6RIA3 AC084262.1-201ENST00000567818 751 ntBASIC15.08■□□□□ 0
LOC285556D6RIA3 MIR4309-201ENST00000582498 83 ntBASIC15.08■□□□□ 0
LOC285556D6RIA3 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.08■□□□□ 0
LOC285556D6RIA3 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LOC285556D6RIA3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.08■□□□□ 0
LOC285556D6RIA3 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.07■□□□□ 0
LOC285556D6RIA3 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC15.07■□□□□ 0
LOC285556D6RIA3 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 GGT8P-201ENST00000418938 532 ntBASIC15.07■□□□□ 0
LOC285556D6RIA3 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC15.07■□□□□ 0
LOC285556D6RIA3 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LOC285556D6RIA3 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC15.07■□□□□ 0
LOC285556D6RIA3 AL606834.1-201ENST00000553836 1169 ntBASIC15.07■□□□□ 0
LOC285556D6RIA3 NEMF-210ENST00000556672 590 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC15.07■□□□□ 0
LOC285556D6RIA3 SNORD55-201ENST00000581525 80 ntBASIC15.07■□□□□ 0
LOC285556D6RIA3 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.07■□□□□ 0
LOC285556D6RIA3 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC15.07■□□□□ 0
LOC285556D6RIA3 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC15.07■□□□□ 0
LOC285556D6RIA3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.07■□□□□ 0
LOC285556D6RIA3 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC15.07■□□□□ 0
LOC285556D6RIA3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LOC285556D6RIA3 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LOC285556D6RIA3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LOC285556D6RIA3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LOC285556D6RIA3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms