Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 AC131235.2-201ENST00000445553 1057 ntBASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 AC067942.2-201ENST00000506227 1268 ntBASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 EEF1GP2-201ENST00000509352 1243 ntBASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 AL606834.1-201ENST00000553836 1169 ntBASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 MIR941-1-201ENST00000636396 72 ntBASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTF1AQ7RTS3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTF1AQ7RTS3 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AC015959.1-201ENST00000623263 1377 ntBASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 MIR324-201ENST00000362183 83 ntBASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AL391822.1-201ENST00000452580 562 ntBASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AC112694.1-202ENST00000540985 943 ntBASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AP003170.2-201ENST00000544730 786 ntBASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 LINC00643-207ENST00000637212 734 ntBASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTF1AQ7RTS3 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 AC139749.1-202ENST00000617529 3139 ntBASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 AC006987.4-201ENST00000430032 279 ntBASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 OVOL1-AS1-203ENST00000534178 493 ntTSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTF1AQ7RTS3 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms