Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AFDNP55196 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC16.83■□□□□ 0.29
AFDNP55196 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
AFDNP55196 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.83■□□□□ 0.28
AFDNP55196 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AFDNP55196 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 DUX4L31-201ENST00000446466 1136 ntBASIC16.83■□□□□ 0.28
AFDNP55196 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC16.83■□□□□ 0.28
AFDNP55196 AF186996.6-201ENST00000485294 149 ntBASIC16.83■□□□□ 0.28
AFDNP55196 AL450346.2-201ENST00000495602 1024 ntBASIC16.83■□□□□ 0.28
AFDNP55196 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AFDNP55196 AL031768.1-201ENST00000606542 701 ntBASIC16.83■□□□□ 0.28
AFDNP55196 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.83■□□□□ 0.28
AFDNP55196 ATF4P4-201ENST00000393544 1930 ntBASIC16.83■□□□□ 0.28
AFDNP55196 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AFDNP55196 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.83■□□□□ 0.28
AFDNP55196 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 RN7SL646P-201ENST00000492969 297 ntBASIC16.82■□□□□ 0.28
AFDNP55196 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
AFDNP55196 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC16.82■□□□□ 0.28
AFDNP55196 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 AC104759.1-201ENST00000559109 939 ntBASIC16.82■□□□□ 0.28
AFDNP55196 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC16.82■□□□□ 0.28
AFDNP55196 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC16.82■□□□□ 0.28
AFDNP55196 AC134878.2-201ENST00000620700 1265 ntBASIC16.82■□□□□ 0.28
AFDNP55196 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 TUBB8P5-201ENST00000445286 1351 ntBASIC16.82■□□□□ 0.28
AFDNP55196 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 SNORA30.1-201ENST00000363193 129 ntBASIC16.82■□□□□ 0.28
AFDNP55196 COQ4-202ENST00000372875 928 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC16.82■□□□□ 0.28
AFDNP55196 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC16.82■□□□□ 0.28
AFDNP55196 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AFDNP55196 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC16.82■□□□□ 0.28
AFDNP55196 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC16.82■□□□□ 0.28
AFDNP55196 FRG2EP-201ENST00000634243 835 ntBASIC16.82■□□□□ 0.28
AFDNP55196 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC16.81■□□□□ 0.28
AFDNP55196 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.81■□□□□ 0.28
AFDNP55196 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.81■□□□□ 0.28
AFDNP55196 RPL4P6-201ENST00000438116 1304 ntBASIC16.81■□□□□ 0.28
AFDNP55196 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.81■□□□□ 0.28
AFDNP55196 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
AFDNP55196 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
AFDNP55196 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
AFDNP55196 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AFDNP55196 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms