Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
ATRXP46100 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.38□□□□□ -0.43
ATRXP46100 AL118508.1-201ENST00000613502 2345 ntBASIC12.38□□□□□ -0.43
ATRXP46100 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ATRXP46100 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 TFAM-201ENST00000373895 973 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 AC073089.1-201ENST00000457546 214 ntBASIC12.38□□□□□ -0.43
ATRXP46100 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.38□□□□□ -0.43
ATRXP46100 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 AC092368.1-201ENST00000568014 733 ntBASIC12.38□□□□□ -0.43
ATRXP46100 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ATRXP46100 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.38□□□□□ -0.43
ATRXP46100 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ATRXP46100 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ATRXP46100 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.38□□□□□ -0.43
ATRXP46100 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.37□□□□□ -0.43
ATRXP46100 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.37□□□□□ -0.43
ATRXP46100 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ATRXP46100 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 RN7SL559P-201ENST00000476501 297 ntBASIC12.37□□□□□ -0.43
ATRXP46100 FPGT-205ENST00000482102 561 ntTSL 4 BASIC12.37□□□□□ -0.43
ATRXP46100 AC104115.1-201ENST00000484005 623 ntBASIC12.37□□□□□ -0.43
ATRXP46100 AC108082.1-201ENST00000510857 331 ntBASIC12.37□□□□□ -0.43
ATRXP46100 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC12.37□□□□□ -0.43
ATRXP46100 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC12.37□□□□□ -0.43
ATRXP46100 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC12.37□□□□□ -0.43
ATRXP46100 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 AL139035.1-202ENST00000626308 565 ntTSL 4 BASIC12.37□□□□□ -0.43
ATRXP46100 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.37□□□□□ -0.43
ATRXP46100 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ATRXP46100 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ATRXP46100 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 SMUG1-201ENST00000243112 627 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ATRXP46100 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.37□□□□□ -0.43
ATRXP46100 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ATRXP46100 IGLCOR22-1-201ENST00000523725 316 ntBASIC12.37□□□□□ -0.43
ATRXP46100 AP005018.2-201ENST00000528464 822 ntBASIC12.37□□□□□ -0.43
ATRXP46100 CIPC-206ENST00000555611 599 ntTSL 4 BASIC12.37□□□□□ -0.43
ATRXP46100 AC093802.2-201ENST00000567853 583 ntBASIC12.37□□□□□ -0.43
ATRXP46100 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ATRXP46100 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.37□□□□□ -0.43
ATRXP46100 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.37□□□□□ -0.43
ATRXP46100 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ATRXP46100 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.36□□□□□ -0.43
ATRXP46100 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ATRXP46100 PMF1-201ENST00000368273 884 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms