Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 AC106818.1-201ENST00000623223 3242 ntBASIC13.61□□□□□ -0.23
SATB2Q9UPW6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SATB2Q9UPW6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 GNG10P1-201ENST00000452289 199 ntBASIC13.6□□□□□ -0.23
SATB2Q9UPW6 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 FAM86B3P-203ENST00000523992 854 ntBASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 LAP3P2-201ENST00000454686 1454 ntBASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AC025183.3-201ENST00000623526 1482 ntBASIC13.6□□□□□ -0.23
SATB2Q9UPW6 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AC064801.2-201ENST00000625052 1303 ntBASIC13.6□□□□□ -0.23
SATB2Q9UPW6 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SATB2Q9UPW6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 AC012617.1-204ENST00000586340 2305 ntBASIC13.59□□□□□ -0.23
SATB2Q9UPW6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 ACTG1P19-201ENST00000418987 1116 ntBASIC13.59□□□□□ -0.23
SATB2Q9UPW6 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SATB2Q9UPW6 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms