Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 CRIP1P2-201ENST00000425396 228 ntBASIC13.62□□□□□ -0.23
NCDNQ9UBB6 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 RNA5SP288-201ENST00000516075 93 ntBASIC13.62□□□□□ -0.23
NCDNQ9UBB6 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 AC021321.1-201ENST00000607397 1113 ntBASIC13.62□□□□□ -0.23
NCDNQ9UBB6 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NCDNQ9UBB6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 DUX4L31-201ENST00000446466 1136 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AC113398.1-201ENST00000464124 406 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RN7SL69P-201ENST00000468423 272 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AC233724.9-201ENST00000511694 407 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 ABCD1P3-201ENST00000562927 605 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RN7SL300P-201ENST00000582522 318 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 IFNL3P1-201ENST00000595082 501 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AC139100.2-201ENST00000616901 662 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AC134878.2-201ENST00000620700 1265 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AC106785.2-201ENST00000564385 1319 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NCDNQ9UBB6 AC027601.5-201ENST00000624065 2482 ntBASIC13.61□□□□□ -0.23
NCDNQ9UBB6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms