Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC009237.11-201ENST00000425635 265 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC007312.1-201ENST00000427493 258 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 RPL18AP2-201ENST00000450007 482 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC018892.1-201ENST00000451098 265 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 CHORDC2P-201ENST00000557601 1090 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 HP-215ENST00000569639 568 ntTSL 4 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 KRTAP10-9-203ENST00000616529 615 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 LINC00643-207ENST00000637212 734 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC089987.1-202ENST00000641959 426 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 KIR2DL4-201ENST00000345540 1447 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 TSPY26P-202ENST00000565928 3884 ntBASIC12.36□□□□□ -0.43
CHD8Q9HCK8 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CHD8Q9HCK8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC008738.4-201ENST00000590492 700 ntTSL 3 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC007728.3-201ENST00000602304 746 ntBASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC008993.1-201ENST00000632280 776 ntBASIC12.35□□□□□ -0.43
CHD8Q9HCK8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC024075.2-201ENST00000598112 1473 ntBASIC12.35□□□□□ -0.43
CHD8Q9HCK8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC005014.1-201ENST00000432006 2976 ntBASIC12.35□□□□□ -0.43
CHD8Q9HCK8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 HNRNPA1P46-201ENST00000411735 937 ntBASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 SLC22A18AS-201ENST00000455942 697 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 PPATP1-201ENST00000496669 1547 ntBASIC12.35□□□□□ -0.43
CHD8Q9HCK8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CHD8Q9HCK8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms