Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 RPS9P1-201ENST00000419943 583 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 GOLGA2P4-201ENST00000441462 777 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 SLC25A15P3-201ENST00000505530 290 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AC005740.2-201ENST00000511085 419 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AC005740.1-201ENST00000515639 522 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 FAM8A2P-201ENST00000528813 1142 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 MIR3940-201ENST00000579148 102 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 AC009542.2-202ENST00000619004 1067 ntBASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
POLR2J2Q9GZM3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 AL021155.1-201ENST00000438808 2637 ntBASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 AL591846.1-201ENST00000451736 433 ntBASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 SERPINA13P-202ENST00000478994 924 ntBASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 MIR6805-201ENST00000615055 62 ntBASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
POLR2J2Q9GZM3 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms