Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 MIR1307-201ENST00000408840 149 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 AC130709.1-201ENST00000484779 1212 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 MIR4326-201ENST00000582203 59 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 AL356740.1-201ENST00000602192 1297 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 SPCS2P2-201ENST00000603270 608 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 ACTG1P22-201ENST00000603793 1099 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 AC242376.2-201ENST00000619355 883 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 AC103798.2-201ENST00000624292 632 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 AL359845.1-201ENST00000458202 1648 ntBASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LYSMD3Q7Z3D4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC245140.2-201ENST00000624054 1939 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 RCC2P5-201ENST00000492126 1487 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 MIR33B-201ENST00000385104 96 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 RN7SKP109-201ENST00000410592 316 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 STK24P1-201ENST00000455035 1291 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AL031713.1-201ENST00000564813 661 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 MIR3940-201ENST00000579148 102 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AC087392.5-201ENST00000612517 489 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 AL805961.1-201ENST00000642026 753 ntBASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD3Q7Z3D4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms