Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 AC090825.2-201ENST00000557959 739 ntBASIC16.88■□□□□ 0.29
RC3H1Q5TC82 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RC3H1Q5TC82 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 MIR766-201ENST00000390223 111 ntBASIC16.87■□□□□ 0.29
RC3H1Q5TC82 BX088651.3-201ENST00000418155 352 ntBASIC16.87■□□□□ 0.29
RC3H1Q5TC82 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 AL137077.1-201ENST00000442115 528 ntBASIC16.87■□□□□ 0.29
RC3H1Q5TC82 RPL21P135-201ENST00000442539 791 ntBASIC16.87■□□□□ 0.29
RC3H1Q5TC82 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 JPT1-205ENST00000470924 663 ntTSL 5 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TMA16-204ENST00000508268 608 ntTSL 2 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 ZFAND1-201ENST00000220669 1798 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 ZFAND1-221ENST00000523096 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 Z97653.2-201ENST00000623057 1418 ntBASIC16.87■□□□□ 0.29
RC3H1Q5TC82 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RC3H1Q5TC82 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 C8orf49-201ENST00000525043 1968 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 PI4KAP2-201ENST00000360806 2080 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 AC079325.1-201ENST00000430386 857 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 AC012100.1-201ENST00000470304 282 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 HNRNPA1P72-201ENST00000529511 967 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 PPY-202ENST00000587006 431 ntTSL 3 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 AC127002.1-201ENST00000619123 455 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 BX510359.7-201ENST00000619819 630 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 AC015656.1-201ENST00000624209 3578 ntBASIC16.86■□□□□ 0.29
RC3H1Q5TC82 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RC3H1Q5TC82 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC16.85■□□□□ 0.29
RC3H1Q5TC82 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms