Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 TPM3P7-201ENST00000338274 732 ntBASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 CLK2P1-201ENST00000416636 1294 ntBASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 FPGT-205ENST00000482102 561 ntTSL 4 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AP001102.1-201ENST00000528959 409 ntBASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 MED11-203ENST00000575284 652 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 RN7SL275P-201ENST00000582762 335 ntBASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC244097.1-201ENST00000621631 1216 ntBASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO4Q2I0M5 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 PCDHA3-202ENST00000532566 4594 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AP001267.2-201ENST00000532619 2086 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 SRSF9P1-201ENST00000399149 530 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 CACYBPP3-201ENST00000406011 625 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 RBMXP1-201ENST00000408004 1191 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AL356583.3-201ENST00000412354 417 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 PRDX3P2-201ENST00000447051 611 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AC008267.3-201ENST00000448776 712 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 PRDX2P3-201ENST00000515779 586 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 MTND2P7-201ENST00000521337 640 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 AC092535.4-201ENST00000609548 397 ntBASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO4Q2I0M5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms