Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SKP1P63208 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SKP1P63208 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.12□□□□□ -0.31
SKP1P63208 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SKP1P63208 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 RNVU1-8-201ENST00000364272 125 ntBASIC13.11□□□□□ -0.31
SKP1P63208 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 HINT2P1-201ENST00000419438 481 ntBASIC13.11□□□□□ -0.31
SKP1P63208 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 AC078991.1-201ENST00000437297 610 ntBASIC13.11□□□□□ -0.31
SKP1P63208 RN7SL375P-201ENST00000492442 298 ntBASIC13.11□□□□□ -0.31
SKP1P63208 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SKP1P63208 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.11□□□□□ -0.31
SKP1P63208 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.11□□□□□ -0.31
SKP1P63208 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SKP1P63208 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
SKP1P63208 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.11□□□□□ -0.31
SKP1P63208 AL009176.1-201ENST00000607876 650 ntBASIC13.11□□□□□ -0.31
SKP1P63208 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.11□□□□□ -0.31
SKP1P63208 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 AC010336.1-201ENST00000539278 4739 ntBASIC13.11□□□□□ -0.31
SKP1P63208 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.11□□□□□ -0.31
SKP1P63208 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SKP1P63208 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SKP1P63208 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.1□□□□□ -0.31
SKP1P63208 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SKP1P63208 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SKP1P63208 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SKP1P63208 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 AC005252.3-201ENST00000623855 2258 ntBASIC13.1□□□□□ -0.31
SKP1P63208 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.1□□□□□ -0.31
SKP1P63208 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SKP1P63208 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC13.1□□□□□ -0.31
SKP1P63208 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SKP1P63208 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.1□□□□□ -0.31
SKP1P63208 AC073210.1-201ENST00000414799 232 ntBASIC13.1□□□□□ -0.31
SKP1P63208 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.1□□□□□ -0.31
SKP1P63208 DPY19L2P5-201ENST00000456300 331 ntBASIC13.1□□□□□ -0.31
SKP1P63208 RN7SL181P-201ENST00000462921 277 ntBASIC13.1□□□□□ -0.31
SKP1P63208 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SKP1P63208 AP000911.2-201ENST00000534330 502 ntBASIC13.1□□□□□ -0.31
SKP1P63208 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.1□□□□□ -0.31
SKP1P63208 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms