Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
NKX2-5P52952 BCL11A-202ENST00000356842 3959 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NKX2-5P52952 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC11.62□□□□□ -0.55
NKX2-5P52952 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.62□□□□□ -0.55
NKX2-5P52952 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
NKX2-5P52952 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NKX2-5P52952 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
NKX2-5P52952 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
NKX2-5P52952 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 FRMD1-201ENST00000283309 3067 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 GP1BA-201ENST00000329125 2501 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC11.61□□□□□ -0.55
NKX2-5P52952 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 ASIC2-202ENST00000359872 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 MTFR1L-201ENST00000374300 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 AP000897.1-201ENST00000584036 1613 ntBASIC11.61□□□□□ -0.55
NKX2-5P52952 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
NKX2-5P52952 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 MASTL-201ENST00000342386 2968 ntTSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 RN7SKP230-201ENST00000365642 335 ntBASIC11.61□□□□□ -0.55
NKX2-5P52952 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.61□□□□□ -0.55
NKX2-5P52952 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-5P52952 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-5P52952 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
NKX2-5P52952 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-5P52952 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 AL135744.1-201ENST00000565098 629 ntBASIC11.61□□□□□ -0.55
NKX2-5P52952 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-5P52952 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC11.61□□□□□ -0.55
NKX2-5P52952 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.61□□□□□ -0.55
NKX2-5P52952 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.61□□□□□ -0.55
NKX2-5P52952 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 RAP1GAP2-203ENST00000540393 3218 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
NKX2-5P52952 TMEM105-201ENST00000332900 3321 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NKX2-5P52952 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NKX2-5P52952 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
NKX2-5P52952 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
NKX2-5P52952 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 RANBP20P-201ENST00000557256 2104 ntBASIC11.6□□□□□ -0.55
NKX2-5P52952 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 LINC01166-201ENST00000443633 2619 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 KLF17-201ENST00000372299 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 FAM95B1-212ENST00000592873 4692 ntBASIC11.6□□□□□ -0.55
NKX2-5P52952 NCAM1-230ENST00000621850 2787 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 AC002056.1-201ENST00000395613 760 ntBASIC11.6□□□□□ -0.55
NKX2-5P52952 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
NKX2-5P52952 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 DNM1P51-201ENST00000558149 522 ntBASIC11.6□□□□□ -0.55
NKX2-5P52952 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 MIR3652-201ENST00000579335 131 ntBASIC11.6□□□□□ -0.55
NKX2-5P52952 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NKX2-5P52952 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.6□□□□□ -0.55
NKX2-5P52952 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC11.6□□□□□ -0.55
NKX2-5P52952 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC11.6□□□□□ -0.55
NKX2-5P52952 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NKX2-5P52952 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms