Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AL009176.1-201ENST00000607876 650 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 AP000322.3-201ENST00000608665 388 ntBASIC12.46□□□□□ -0.41
APOBEC1P41238 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
APOBEC1P41238 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
APOBEC1P41238 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.46□□□□□ -0.41
APOBEC1P41238 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
APOBEC1P41238 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBEC1P41238 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBEC1P41238 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBEC1P41238 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
APOBEC1P41238 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
APOBEC1P41238 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
APOBEC1P41238 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
APOBEC1P41238 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
APOBEC1P41238 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.46□□□□□ -0.42
APOBEC1P41238 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APOBEC1P41238 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBEC1P41238 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.45□□□□□ -0.42
APOBEC1P41238 TUBB2BP1-201ENST00000404155 871 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 OR52M2P-201ENST00000414298 959 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBEC1P41238 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.45□□□□□ -0.42
APOBEC1P41238 STK24P1-201ENST00000455035 1291 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBEC1P41238 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.45□□□□□ -0.42
APOBEC1P41238 RN7SKP155-201ENST00000516031 288 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 AC105129.2-201ENST00000559536 390 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.45□□□□□ -0.42
APOBEC1P41238 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBEC1P41238 AC007250.1-201ENST00000608934 338 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
APOBEC1P41238 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBEC1P41238 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.45□□□□□ -0.42
APOBEC1P41238 FP325330.2-201ENST00000624219 5630 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.45□□□□□ -0.42
APOBEC1P41238 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.45□□□□□ -0.42
APOBEC1P41238 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOBEC1P41238 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.45□□□□□ -0.42
APOBEC1P41238 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.44□□□□□ -0.42
APOBEC1P41238 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
APOBEC1P41238 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOBEC1P41238 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms