Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2B1P20020 AL139424.3-202ENST00000641619 917 ntBASIC15.96■□□□□ 0.15
ATP2B1P20020 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP2B1P20020 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2B1P20020 AL359845.1-201ENST00000458202 1648 ntBASIC15.96■□□□□ 0.15
ATP2B1P20020 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2B1P20020 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP2B1P20020 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATP2B1P20020 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2B1P20020 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP2B1P20020 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2B1P20020 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP2B1P20020 MARK2P16-201ENST00000605714 1723 ntBASIC15.96■□□□□ 0.15
ATP2B1P20020 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2B1P20020 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP2B1P20020 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP2B1P20020 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATP2B1P20020 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATP2B1P20020 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATP2B1P20020 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATP2B1P20020 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATP2B1P20020 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
ATP2B1P20020 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
ATP2B1P20020 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.14
ATP2B1P20020 TBC1D27-202ENST00000424239 1573 ntBASIC15.96■□□□□ 0.14
ATP2B1P20020 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATP2B1P20020 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP2B1P20020 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
ATP2B1P20020 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 AC020917.4-201ENST00000623994 1999 ntBASIC15.95■□□□□ 0.14
ATP2B1P20020 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP2B1P20020 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP2B1P20020 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 SLC25A24P2-201ENST00000415059 510 ntBASIC15.95■□□□□ 0.14
ATP2B1P20020 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
ATP2B1P20020 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP2B1P20020 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.95■□□□□ 0.14
ATP2B1P20020 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP2B1P20020 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.95■□□□□ 0.14
ATP2B1P20020 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP2B1P20020 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP2B1P20020 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP2B1P20020 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP2B1P20020 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
ATP2B1P20020 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
ATP2B1P20020 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 AC004241.5-201ENST00000623870 2448 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP2B1P20020 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 AC125807.2-201ENST00000513358 3514 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
ATP2B1P20020 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP2B1P20020 AL807761.2-201ENST00000422849 729 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.94■□□□□ 0.14
ATP2B1P20020 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 AC114947.1-202ENST00000514136 344 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.94■□□□□ 0.14
ATP2B1P20020 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.94■□□□□ 0.14
ATP2B1P20020 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP2B1P20020 MIR3619-201ENST00000579667 83 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 MIR4754-201ENST00000582477 89 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 AC015967.2-201ENST00000624092 234 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 AL161773.1-201ENST00000624845 863 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 AC006435.4-201ENST00000625037 234 ntBASIC15.94■□□□□ 0.14
ATP2B1P20020 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms