Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 HLA-DMA-203ENST00000395305 777 ntBASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 MIR4522-201ENST00000584932 87 ntBASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 GPR182-203ENST00000622922 591 ntBASIC12.14□□□□□ -0.47
NPIPB4C9JG80 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AP001184.1-201ENST00000637936 376 ntBASIC12.14□□□□□ -0.47
NPIPB4C9JG80 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NPIPB4C9JG80 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 ABCD1P4-201ENST00000399687 604 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AL627422.1-201ENST00000434104 580 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 RN7SL720P-201ENST00000488178 304 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 MRPL22P1-201ENST00000505398 616 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 RN7SKP155-201ENST00000516031 288 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AL137779.3-201ENST00000553295 729 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 DNM1P51-201ENST00000558149 522 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 MIR8071-1-201ENST00000616769 65 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 MIR8071-2-201ENST00000616772 65 ntBASIC12.13□□□□□ -0.47
NPIPB4C9JG80 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
NPIPB4C9JG80 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NPIPB4C9JG80 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms