Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX49Q9Y6V7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX49Q9Y6V7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 ANOS2P-203ENST00000472227 1816 ntBASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX49Q9Y6V7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
DDX49Q9Y6V7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX49Q9Y6V7 AL512631.2-201ENST00000604634 923 ntBASIC26.59■■□□□ 1.85
DDX49Q9Y6V7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX49Q9Y6V7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 SNX5-217ENST00000606557 1087 ntBASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX49Q9Y6V7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 MIR935-201ENST00000401179 91 ntBASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 AC110285.6-201ENST00000617652 491 ntBASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.57■■□□□ 1.84
DDX49Q9Y6V7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX49Q9Y6V7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX49Q9Y6V7 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.56■■□□□ 1.84
DDX49Q9Y6V7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
DDX49Q9Y6V7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.56■■□□□ 1.84
DDX49Q9Y6V7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
DDX49Q9Y6V7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 AL356740.2-201ENST00000601559 647 ntBASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
DDX49Q9Y6V7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 AL139246.5-201ENST00000606645 996 ntBASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.54■■□□□ 1.84
DDX49Q9Y6V7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 AC096631.2-201ENST00000436136 790 ntBASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 DUSP8P3-201ENST00000399571 1760 ntBASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 LINC00526-201ENST00000581067 1875 ntBASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
DDX49Q9Y6V7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
DDX49Q9Y6V7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms