Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGC4Q9Y5F7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGC4Q9Y5F7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 UNC93B3-201ENST00000308076 687 ntBASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 SYT6-210ENST00000641643 1587 ntBASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHGC4Q9Y5F7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 DUX4L19-201ENST00000557448 1267 ntBASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.2
PCDHGC4Q9Y5F7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHGC4Q9Y5F7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 SERBP1P1-201ENST00000396021 1160 ntBASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 pRNA.6-201ENST00000610482 90 ntBASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 pRNA.5-201ENST00000612139 90 ntBASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 pRNA.11-201ENST00000618423 90 ntBASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 pRNA.13-201ENST00000619112 90 ntBASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGC4Q9Y5F7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 MIR3181-201ENST00000578512 73 ntBASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 AC110285.6-201ENST00000617652 491 ntBASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGC4Q9Y5F7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGC4Q9Y5F7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 AL136162.1-201ENST00000607711 1078 ntBASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 DUSP8P3-201ENST00000399571 1760 ntBASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.48■■□□□ 1.19
PCDHGC4Q9Y5F7 DUSP8P5-201ENST00000422884 1815 ntBASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGC4Q9Y5F7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms