Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.75■■□□□ 1.07
RNF11Q9Y3C5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF11Q9Y3C5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF11Q9Y3C5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF11Q9Y3C5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.74■■□□□ 1.07
RNF11Q9Y3C5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF11Q9Y3C5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 C1orf229-201ENST00000623686 2258 ntBASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RNF11Q9Y3C5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF11Q9Y3C5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 MIR6722-201ENST00000617286 78 ntBASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RNF11Q9Y3C5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF11Q9Y3C5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RNF11Q9Y3C5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF11Q9Y3C5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 AC092028.1-203ENST00000608262 953 ntBASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.69■■□□□ 1.06
RNF11Q9Y3C5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 KRT125P-201ENST00000546827 989 ntBASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 AL353803.4-201ENST00000565882 1934 ntBASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF11Q9Y3C5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 AC005703.6-201ENST00000623265 1329 ntBASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 Z92544.1-202ENST00000571933 1220 ntBASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RNF11Q9Y3C5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms