Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M1Q9Y2T2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AP3M1Q9Y2T2 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.06■□□□□ 0.96
AP3M1Q9Y2T2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
AP3M1Q9Y2T2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.06■□□□□ 0.96
AP3M1Q9Y2T2 AL353803.4-201ENST00000565882 1934 ntBASIC21.06■□□□□ 0.96
AP3M1Q9Y2T2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.05■□□□□ 0.96
AP3M1Q9Y2T2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 C11orf96-202ENST00000528572 1834 ntBASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP3M1Q9Y2T2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 AC139530.1-201ENST00000575312 1977 ntBASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.03■□□□□ 0.96
AP3M1Q9Y2T2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
AP3M1Q9Y2T2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.02■□□□□ 0.96
AP3M1Q9Y2T2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3M1Q9Y2T2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3M1Q9Y2T2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP3M1Q9Y2T2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 AC139795.1-202ENST00000500444 432 ntBASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 AC120024.1-201ENST00000562672 995 ntBASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP3M1Q9Y2T2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP3M1Q9Y2T2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 AF131216.4-201ENST00000638924 1588 ntBASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 KRT18P24-201ENST00000344739 1156 ntBASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.99■□□□□ 0.95
AP3M1Q9Y2T2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
AP3M1Q9Y2T2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3M1Q9Y2T2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3M1Q9Y2T2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP3M1Q9Y2T2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP3M1Q9Y2T2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.98■□□□□ 0.95
AP3M1Q9Y2T2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms