Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPH3ALQ9UNE2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.31■□□□□ 0.36
RPH3ALQ9UNE2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPH3ALQ9UNE2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.31■□□□□ 0.36
RPH3ALQ9UNE2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPH3ALQ9UNE2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPH3ALQ9UNE2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 LINC00526-201ENST00000581067 1875 ntBASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPH3ALQ9UNE2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 AIRN-201ENST00000601203 4374 ntBASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.29■□□□□ 0.36
RPH3ALQ9UNE2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.28■□□□□ 0.36
RPH3ALQ9UNE2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RPH3ALQ9UNE2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3ALQ9UNE2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3ALQ9UNE2 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.27■□□□□ 0.35
RPH3ALQ9UNE2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RPH3ALQ9UNE2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RPH3ALQ9UNE2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 MIR639-201ENST00000384974 98 ntBASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 AC133552.2-201ENST00000619106 1032 ntBASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.25■□□□□ 0.35
RPH3ALQ9UNE2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPH3ALQ9UNE2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPH3ALQ9UNE2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RPH3ALQ9UNE2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPH3ALQ9UNE2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPH3ALQ9UNE2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPH3ALQ9UNE2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms