Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 AC120024.1-201ENST00000562672 995 ntBASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB4Q9UN71 AC131274.2-201ENST00000580697 1507 ntBASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 ALDH1A3-203ENST00000557963 1670 ntBASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 TSPY13P-201ENST00000338964 914 ntBASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 THA1P-201ENST00000590384 1145 ntBASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB4Q9UN71 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 KRT18P24-201ENST00000344739 1156 ntBASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHGB4Q9UN71 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHGB4Q9UN71 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHGB4Q9UN71 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 AC092068.2-201ENST00000590491 1708 ntBASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHGB4Q9UN71 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 AC010980.1-201ENST00000587192 1142 ntBASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHGB4Q9UN71 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHGB4Q9UN71 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHGB4Q9UN71 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
PCDHGB4Q9UN71 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHGB4Q9UN71 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHGB4Q9UN71 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB4Q9UN71 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGB4Q9UN71 AC127496.7-201ENST00000625110 1798 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms