Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 MIR4787-201ENST00000607364 84 ntBASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 AF131216.4-201ENST00000638924 1588 ntBASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNOT11Q9UKZ1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNOT11Q9UKZ1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
CNOT11Q9UKZ1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.35■■□□□ 1.01
CNOT11Q9UKZ1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 AL137060.1-201ENST00000618151 2648 ntBASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CNOT11Q9UKZ1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNOT11Q9UKZ1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNOT11Q9UKZ1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.33■■□□□ 1.01
CNOT11Q9UKZ1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CNOT11Q9UKZ1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CNOT11Q9UKZ1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.33■■□□□ 1.01
CNOT11Q9UKZ1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNOT11Q9UKZ1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNOT11Q9UKZ1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CNOT11Q9UKZ1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 SLC25A24-204ENST00000569674 2357 ntBASIC21.32■■□□□ 1
CNOT11Q9UKZ1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.32■■□□□ 1
CNOT11Q9UKZ1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CNOT11Q9UKZ1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms