Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
KCNIP1Q9NZI2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 AC079834.2-201ENST00000609776 1949 ntBASIC18.66■□□□□ 0.58
KCNIP1Q9NZI2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 AC233723.2-201ENST00000623798 2106 ntBASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 BX664725.1-201ENST00000438252 379 ntBASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KCNIP1Q9NZI2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
KCNIP1Q9NZI2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
KCNIP1Q9NZI2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 AL117328.2-201ENST00000624617 1940 ntBASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KCNIP1Q9NZI2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 C1orf229-201ENST00000623686 2258 ntBASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KCNIP1Q9NZI2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 AC005703.6-201ENST00000623265 1329 ntBASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
KCNIP1Q9NZI2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
KCNIP1Q9NZI2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms