Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 OR2I1P-207ENST00000453522 948 ntBASIC25.6■■□□□ 1.69
RNF146Q9NTX7 AL162430.1-201ENST00000480705 870 ntBASIC25.6■■□□□ 1.69
RNF146Q9NTX7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF146Q9NTX7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 AL139125.2-201ENST00000623134 1869 ntBASIC25.59■■□□□ 1.69
RNF146Q9NTX7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RNF146Q9NTX7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
RNF146Q9NTX7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF146Q9NTX7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
RNF146Q9NTX7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RNF146Q9NTX7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
RNF146Q9NTX7 AC004812.2-201ENST00000611079 2094 ntBASIC25.57■■□□□ 1.68
RNF146Q9NTX7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF146Q9NTX7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF146Q9NTX7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF146Q9NTX7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
RNF146Q9NTX7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 MIR572-201ENST00000384983 95 ntBASIC25.53■■□□□ 1.68
RNF146Q9NTX7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.53■■□□□ 1.68
RNF146Q9NTX7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF146Q9NTX7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF146Q9NTX7 YBX1P1-201ENST00000445822 960 ntBASIC25.52■■□□□ 1.68
RNF146Q9NTX7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF146Q9NTX7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF146Q9NTX7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.52■■□□□ 1.68
RNF146Q9NTX7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF146Q9NTX7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
RNF146Q9NTX7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF146Q9NTX7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF146Q9NTX7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.51■■□□□ 1.67
RNF146Q9NTX7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF146Q9NTX7 AL358852.1-201ENST00000623174 1268 ntBASIC25.51■■□□□ 1.67
RNF146Q9NTX7 AL031602.1-201ENST00000633169 911 ntBASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms