Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MSL2Q9HCI7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 AC006455.2-201ENST00000429931 906 ntBASIC19.09■□□□□ 0.65
MSL2Q9HCI7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 AC009086.3-201ENST00000623486 1008 ntBASIC19.09■□□□□ 0.65
MSL2Q9HCI7 AC241377.3-202ENST00000626088 1088 ntBASIC19.09■□□□□ 0.65
MSL2Q9HCI7 AC241585.3-202ENST00000628937 1088 ntBASIC19.09■□□□□ 0.65
MSL2Q9HCI7 AC245100.8-202ENST00000629247 1058 ntBASIC19.09■□□□□ 0.65
MSL2Q9HCI7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MSL2Q9HCI7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
MSL2Q9HCI7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 LINC01529-204ENST00000636474 1715 ntBASIC19.08■□□□□ 0.64
MSL2Q9HCI7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MSL2Q9HCI7 AL353803.4-201ENST00000565882 1934 ntBASIC19.08■□□□□ 0.64
MSL2Q9HCI7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 AC092171.4-201ENST00000609130 632 ntBASIC19.07■□□□□ 0.64
MSL2Q9HCI7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.07■□□□□ 0.64
MSL2Q9HCI7 FP325331.1-202ENST00000623531 1380 ntBASIC19.06■□□□□ 0.64
MSL2Q9HCI7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 AC092068.2-201ENST00000590491 1708 ntBASIC19.06■□□□□ 0.64
MSL2Q9HCI7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 AC096631.2-201ENST00000436136 790 ntBASIC19.06■□□□□ 0.64
MSL2Q9HCI7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
MSL2Q9HCI7 SYT6-210ENST00000641643 1587 ntBASIC19.06■□□□□ 0.64
MSL2Q9HCI7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MSL2Q9HCI7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MSL2Q9HCI7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms