Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 AL592293.1-201ENST00000502889 1188 ntBASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 SPCS2P3-201ENST00000500401 656 ntBASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF556Q9HAH1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF556Q9HAH1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF556Q9HAH1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 LONRF2P2-201ENST00000439212 571 ntBASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 MIR4449-201ENST00000578365 66 ntBASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 RNF126P1-201ENST00000567452 1320 ntBASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 AC079630.1-202ENST00000618127 1840 ntBASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 AL024507.2-201ENST00000606070 2574 ntBASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 DUX4L9-201ENST00000449051 1259 ntBASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms