Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 AL592293.1-201ENST00000502889 1188 ntBASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF556Q9HAH1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 SPCS2P3-201ENST00000500401 656 ntBASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.6■□□□□ 0.89
ZNF556Q9HAH1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.59■□□□□ 0.89
ZNF556Q9HAH1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ZNF556Q9HAH1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF556Q9HAH1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF556Q9HAH1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF556Q9HAH1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 LONRF2P2-201ENST00000439212 571 ntBASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF556Q9HAH1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 MIR4449-201ENST00000578365 66 ntBASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF556Q9HAH1 RNF126P1-201ENST00000567452 1320 ntBASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 AC079630.1-202ENST00000618127 1840 ntBASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 AL024507.2-201ENST00000606070 2574 ntBASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF556Q9HAH1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 DUX4L9-201ENST00000449051 1259 ntBASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF556Q9HAH1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF556Q9HAH1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms