Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 AC135279.3-201ENST00000610945 1311 ntBASIC22.55■■□□□ 1.2
ATP13A3Q9H7F0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 PBX2P1-201ENST00000493219 1291 ntBASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 MIR3181-201ENST00000578512 73 ntBASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 pRNA.6-201ENST00000610482 90 ntBASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 pRNA.5-201ENST00000612139 90 ntBASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 pRNA.11-201ENST00000618423 90 ntBASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 pRNA.13-201ENST00000619112 90 ntBASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP13A3Q9H7F0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 AC011298.3-201ENST00000615796 283 ntBASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 AC106739.1-201ENST00000617035 715 ntBASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP13A3Q9H7F0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 AC092068.2-201ENST00000590491 1708 ntBASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 AC024257.2-201ENST00000549699 147 ntBASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATP13A3Q9H7F0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 AL353803.4-201ENST00000565882 1934 ntBASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ATP13A3Q9H7F0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ATP13A3Q9H7F0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 AC133561.4-201ENST00000566112 224 ntBASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 AL499627.2-201ENST00000606283 725 ntBASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.49■■□□□ 1.19
ATP13A3Q9H7F0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 AC136469.2-201ENST00000623944 1028 ntBASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.48■■□□□ 1.19
ATP13A3Q9H7F0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ATP13A3Q9H7F0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.47■■□□□ 1.19
ATP13A3Q9H7F0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms