Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ZSWIM1Q9BR11 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.89■■□□□ 1.41
ZSWIM1Q9BR11 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.89■■□□□ 1.41
ZSWIM1Q9BR11 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
ZSWIM1Q9BR11 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ZSWIM1Q9BR11 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 AL512631.2-201ENST00000604634 923 ntBASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZSWIM1Q9BR11 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ZSWIM1Q9BR11 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 C17orf82-201ENST00000623772 1530 ntBASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.86■■□□□ 1.41
ZSWIM1Q9BR11 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 AL356740.2-201ENST00000601559 647 ntBASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
ZSWIM1Q9BR11 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZSWIM1Q9BR11 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 AC144652.1-201ENST00000609974 1624 ntBASIC23.83■■□□□ 1.41
ZSWIM1Q9BR11 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
ZSWIM1Q9BR11 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
ZSWIM1Q9BR11 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 AL353803.4-201ENST00000565882 1934 ntBASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 MIR4466-201ENST00000606121 54 ntBASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.82■■□□□ 1.4
ZSWIM1Q9BR11 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.81■■□□□ 1.4
ZSWIM1Q9BR11 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 AC131281.2-201ENST00000520478 145 ntBASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ZSWIM1Q9BR11 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.79■■□□□ 1.4
ZSWIM1Q9BR11 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.79■■□□□ 1.4
ZSWIM1Q9BR11 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms