Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.52■□□□□ 0.72
VRK1Q99986 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.52■□□□□ 0.72
VRK1Q99986 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VRK1Q99986 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VRK1Q99986 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
VRK1Q99986 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 MIR638-201ENST00000385237 100 ntBASIC19.51■□□□□ 0.71
VRK1Q99986 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 SRD5A1P1-201ENST00000442297 786 ntBASIC19.51■□□□□ 0.71
VRK1Q99986 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK1Q99986 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK1Q99986 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK1Q99986 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
VRK1Q99986 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VRK1Q99986 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.51■□□□□ 0.71
VRK1Q99986 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK1Q99986 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.5■□□□□ 0.71
VRK1Q99986 AC110285.6-201ENST00000617652 491 ntBASIC19.5■□□□□ 0.71
VRK1Q99986 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK1Q99986 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.5■□□□□ 0.71
VRK1Q99986 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
VRK1Q99986 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VRK1Q99986 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VRK1Q99986 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.49■□□□□ 0.71
VRK1Q99986 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VRK1Q99986 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.49■□□□□ 0.71
VRK1Q99986 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VRK1Q99986 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.49■□□□□ 0.71
VRK1Q99986 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.49■□□□□ 0.71
VRK1Q99986 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.49■□□□□ 0.71
VRK1Q99986 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VRK1Q99986 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
VRK1Q99986 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.49■□□□□ 0.71
VRK1Q99986 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VRK1Q99986 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.48■□□□□ 0.71
VRK1Q99986 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.48■□□□□ 0.71
VRK1Q99986 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VRK1Q99986 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK1Q99986 PKD1P6-201ENST00000343738 4769 ntBASIC19.47■□□□□ 0.71
VRK1Q99986 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK1Q99986 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK1Q99986 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VRK1Q99986 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.47■□□□□ 0.71
VRK1Q99986 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VRK1Q99986 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.47■□□□□ 0.71
VRK1Q99986 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VRK1Q99986 HLA-L-211ENST00000482052 1765 ntBASIC19.47■□□□□ 0.71
VRK1Q99986 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
VRK1Q99986 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VRK1Q99986 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VRK1Q99986 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VRK1Q99986 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK1Q99986 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.45■□□□□ 0.7
VRK1Q99986 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VRK1Q99986 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.45■□□□□ 0.7
VRK1Q99986 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VRK1Q99986 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VRK1Q99986 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VRK1Q99986 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK1Q99986 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VRK1Q99986 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
VRK1Q99986 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.45■□□□□ 0.7
VRK1Q99986 PBX2P1-201ENST00000493219 1291 ntBASIC19.45■□□□□ 0.7
VRK1Q99986 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK1Q99986 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
VRK1Q99986 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VRK1Q99986 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
VRK1Q99986 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.44■□□□□ 0.7
VRK1Q99986 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VRK1Q99986 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.44■□□□□ 0.7
VRK1Q99986 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms