Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CPNE1Q99829 LINC00565-201ENST00000562710 2331 ntBASIC22.32■■□□□ 1.16
CPNE1Q99829 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE1Q99829 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE1Q99829 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE1Q99829 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE1Q99829 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE1Q99829 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE1Q99829 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE1Q99829 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE1Q99829 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE1Q99829 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE1Q99829 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.31■■□□□ 1.16
CPNE1Q99829 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE1Q99829 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CPNE1Q99829 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE1Q99829 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE1Q99829 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CPNE1Q99829 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CPNE1Q99829 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.3■■□□□ 1.16
CPNE1Q99829 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
CPNE1Q99829 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
CPNE1Q99829 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.3■■□□□ 1.16
CPNE1Q99829 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.3■■□□□ 1.16
CPNE1Q99829 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.3■■□□□ 1.16
CPNE1Q99829 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.3■■□□□ 1.16
CPNE1Q99829 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE1Q99829 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE1Q99829 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE1Q99829 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CPNE1Q99829 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CPNE1Q99829 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE1Q99829 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.29■■□□□ 1.16
CPNE1Q99829 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CPNE1Q99829 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE1Q99829 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CPNE1Q99829 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE1Q99829 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE1Q99829 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.29■■□□□ 1.16
CPNE1Q99829 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.28■■□□□ 1.16
CPNE1Q99829 AL031848.2-201ENST00000607670 837 ntBASIC22.28■■□□□ 1.16
CPNE1Q99829 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE1Q99829 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.28■■□□□ 1.16
CPNE1Q99829 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE1Q99829 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.28■■□□□ 1.16
CPNE1Q99829 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CPNE1Q99829 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.27■■□□□ 1.16
CPNE1Q99829 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE1Q99829 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.27■■□□□ 1.16
CPNE1Q99829 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE1Q99829 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.27■■□□□ 1.16
CPNE1Q99829 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
CPNE1Q99829 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.27■■□□□ 1.16
CPNE1Q99829 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE1Q99829 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE1Q99829 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE1Q99829 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.26■■□□□ 1.15
CPNE1Q99829 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE1Q99829 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE1Q99829 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE1Q99829 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.26■■□□□ 1.15
CPNE1Q99829 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.26■■□□□ 1.15
CPNE1Q99829 CLDN5-201ENST00000403084 2357 ntBASIC22.26■■□□□ 1.15
CPNE1Q99829 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE1Q99829 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE1Q99829 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE1Q99829 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE1Q99829 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.25■■□□□ 1.15
CPNE1Q99829 MIR6722-201ENST00000617286 78 ntBASIC22.25■■□□□ 1.15
CPNE1Q99829 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE1Q99829 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CPNE1Q99829 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE1Q99829 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE1Q99829 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.25■■□□□ 1.15
CPNE1Q99829 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CPNE1Q99829 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE1Q99829 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CPNE1Q99829 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.24■■□□□ 1.15
CPNE1Q99829 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CPNE1Q99829 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CPNE1Q99829 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CPNE1Q99829 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE1Q99829 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
CPNE1Q99829 AC005703.6-201ENST00000623265 1329 ntBASIC22.24■■□□□ 1.15
CPNE1Q99829 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE1Q99829 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms