Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
SCAF11Q99590 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
SCAF11Q99590 NT5C3AP1-201ENST00000394500 1012 ntBASIC32.43■■■□□ 2.78
SCAF11Q99590 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.43■■■□□ 2.78
SCAF11Q99590 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC32.43■■■□□ 2.78
SCAF11Q99590 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
SCAF11Q99590 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC32.43■■■□□ 2.78
SCAF11Q99590 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SCAF11Q99590 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC32.43■■■□□ 2.78
SCAF11Q99590 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC32.43■■■□□ 2.78
SCAF11Q99590 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
SCAF11Q99590 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
SCAF11Q99590 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC32.42■■■□□ 2.78
SCAF11Q99590 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.42■■■□□ 2.78
SCAF11Q99590 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
SCAF11Q99590 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SCAF11Q99590 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
SCAF11Q99590 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SCAF11Q99590 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC32.42■■■□□ 2.78
SCAF11Q99590 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
SCAF11Q99590 OR2I1P-207ENST00000453522 948 ntBASIC32.41■■■□□ 2.78
SCAF11Q99590 AC010525.1-201ENST00000585559 441 ntBASIC32.41■■■□□ 2.78
SCAF11Q99590 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
SCAF11Q99590 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC32.41■■■□□ 2.78
SCAF11Q99590 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SCAF11Q99590 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SCAF11Q99590 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
SCAF11Q99590 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC32.4■■■□□ 2.78
SCAF11Q99590 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC32.4■■■□□ 2.78
SCAF11Q99590 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
SCAF11Q99590 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
SCAF11Q99590 LHPP-203ENST00000392757 840 ntTSL 3 BASIC32.4■■■□□ 2.78
SCAF11Q99590 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.4■■■□□ 2.78
SCAF11Q99590 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC32.4■■■□□ 2.78
SCAF11Q99590 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
SCAF11Q99590 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.4■■■□□ 2.78
SCAF11Q99590 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC32.4■■■□□ 2.78
SCAF11Q99590 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SCAF11Q99590 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SCAF11Q99590 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
SCAF11Q99590 AC133637.1-201ENST00000624115 1537 ntBASIC32.39■■■□□ 2.78
SCAF11Q99590 GAS2L1P2-201ENST00000436355 1356 ntBASIC32.39■■■□□ 2.78
SCAF11Q99590 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
SCAF11Q99590 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
SCAF11Q99590 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
SCAF11Q99590 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC32.39■■■□□ 2.78
SCAF11Q99590 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
SCAF11Q99590 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.77
SCAF11Q99590 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF11Q99590 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
SCAF11Q99590 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
SCAF11Q99590 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
SCAF11Q99590 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC32.38■■■□□ 2.77
SCAF11Q99590 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF11Q99590 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF11Q99590 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SCAF11Q99590 AL161729.1-201ENST00000604104 1402 ntBASIC32.38■■■□□ 2.77
SCAF11Q99590 MPST-204ENST00000404393 1329 ntTSL 5 BASIC32.37■■■□□ 2.77
SCAF11Q99590 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF11Q99590 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC32.37■■■□□ 2.77
SCAF11Q99590 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF11Q99590 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC32.37■■■□□ 2.77
SCAF11Q99590 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC32.37■■■□□ 2.77
SCAF11Q99590 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SCAF11Q99590 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
SCAF11Q99590 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SCAF11Q99590 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC32.36■■■□□ 2.77
SCAF11Q99590 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SCAF11Q99590 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
SCAF11Q99590 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SCAF11Q99590 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC32.36■■■□□ 2.77
SCAF11Q99590 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
SCAF11Q99590 PPP1R14BP3-201ENST00000509033 445 ntBASIC32.35■■■□□ 2.77
SCAF11Q99590 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC32.35■■■□□ 2.77
SCAF11Q99590 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC32.35■■■□□ 2.77
SCAF11Q99590 AP003733.4-201ENST00000623785 1697 ntBASIC32.35■■■□□ 2.77
SCAF11Q99590 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC32.35■■■□□ 2.77
SCAF11Q99590 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
SCAF11Q99590 AC016769.1-201ENST00000409132 1010 ntBASIC32.35■■■□□ 2.77
SCAF11Q99590 AC137761.2-201ENST00000561729 223 ntBASIC32.35■■■□□ 2.77
SCAF11Q99590 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
SCAF11Q99590 AC145350.3-201ENST00000569033 163 ntBASIC32.35■■■□□ 2.77
SCAF11Q99590 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC32.34■■■□□ 2.77
SCAF11Q99590 SHF-207ENST00000560540 2062 ntTSL 5 BASIC32.34■■■□□ 2.77
SCAF11Q99590 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SCAF11Q99590 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SCAF11Q99590 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
SCAF11Q99590 HSCB-202ENST00000398941 955 ntTSL 2 BASIC32.34■■■□□ 2.77
SCAF11Q99590 AC026185.1-201ENST00000445748 174 ntBASIC32.34■■■□□ 2.77
SCAF11Q99590 AP005435.1-201ENST00000529293 1178 ntBASIC32.34■■■□□ 2.77
SCAF11Q99590 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
SCAF11Q99590 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF11Q99590 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC32.33■■■□□ 2.77
SCAF11Q99590 AL355802.2-201ENST00000402069 882 ntBASIC32.33■■■□□ 2.77
SCAF11Q99590 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC32.33■■■□□ 2.77
SCAF11Q99590 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC32.33■■■□□ 2.77
SCAF11Q99590 AC142381.3-201ENST00000568208 1670 ntBASIC32.33■■■□□ 2.77
SCAF11Q99590 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC32.33■■■□□ 2.77
SCAF11Q99590 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
SCAF11Q99590 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms