Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 AL121603.2-201ENST00000557373 2117 ntBASIC18.61■□□□□ 0.57
CLCC1Q96S66 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCC1Q96S66 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCC1Q96S66 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLCC1Q96S66 AC090877.2-201ENST00000558441 1738 ntBASIC18.6■□□□□ 0.57
CLCC1Q96S66 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.6■□□□□ 0.57
CLCC1Q96S66 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCC1Q96S66 AC233723.2-201ENST00000623798 2106 ntBASIC18.59■□□□□ 0.57
CLCC1Q96S66 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.59■□□□□ 0.57
CLCC1Q96S66 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CLCC1Q96S66 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.59■□□□□ 0.57
CLCC1Q96S66 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLCC1Q96S66 PVT1_1.1-201ENST00000615125 194 ntBASIC18.59■□□□□ 0.57
CLCC1Q96S66 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCC1Q96S66 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.58■□□□□ 0.57
CLCC1Q96S66 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLCC1Q96S66 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CLCC1Q96S66 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCC1Q96S66 AC074183.2-201ENST00000623112 922 ntBASIC18.58■□□□□ 0.56
CLCC1Q96S66 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.58■□□□□ 0.56
CLCC1Q96S66 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLCC1Q96S66 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCC1Q96S66 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCC1Q96S66 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLCC1Q96S66 KRT8P33-201ENST00000508125 1423 ntBASIC18.57■□□□□ 0.56
CLCC1Q96S66 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCC1Q96S66 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CLCC1Q96S66 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCC1Q96S66 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCC1Q96S66 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLCC1Q96S66 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.57■□□□□ 0.56
CLCC1Q96S66 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLCC1Q96S66 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CLCC1Q96S66 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.56■□□□□ 0.56
CLCC1Q96S66 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
CLCC1Q96S66 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.56■□□□□ 0.56
CLCC1Q96S66 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.56■□□□□ 0.56
CLCC1Q96S66 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLCC1Q96S66 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLCC1Q96S66 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLCC1Q96S66 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms